說明
This project reports genetic data from the non-indigenous species (NIS) monitoring program in Sweden in 2024, as commissioned by the Swedish Agency for Marine and Water Management, SwAM. The data were collected and submitted by Seanalytics, www.seanalytics.se in collaboration with University of Gothenburg. Sampling locations were situated in ports and marinas along the Swedish coast, including the Bothnian gulf, the Swedish West coast and Southern coast. Three types of samples (water samples, plankton samples, hard bottom samples) were collected during two seasons - late spring and late summer. Species were identified using COI metabarcoding. The dataset includes ASVs (amplicon sequence variants) and their associated metadata. Field protocols are documented in Sundberg et al (2024) DNA-baserad övervakning av arter i akvatisk miljö - verifiering och tillämpning. Naturvårdsverket rapport. pp 44. Rapport 7157. ISBN 978-91-620-7157-8 and Sundberg et al (2022) Genetic methods in environmental monitoring: Early detection and monitoring of non-indigenous species based on DNA. Report to the Swedish Agency for Marine and Water Management 2022:4. ISBN: 978-91-89329-32-4.
This dataset was published via the SBDI ASV portal.
資料紀錄
此資源出現紀錄的資料已發佈為達爾文核心集檔案（DwC-A），其以一或多組資料表構成分享生物多樣性資料的標準格式。 核心資料表包含 102,723 筆紀錄。
亦存在 1 筆延伸集的資料表。延伸集中的紀錄補充核心集中紀錄的額外資訊。 每個延伸集資料表中資料筆數顯示如下。
此 IPT 存放資料以提供資料儲存庫服務。資料與資源的詮釋資料可由「下載」單元下載。「版本」表格列出此資源的其它公開版本，以便利追蹤其隨時間的變更。
版本
以下的表格只顯示可公開存取資源的已發布版本。
如何引用
研究者應依照以下指示引用此資源。:
Obst M (2025). National monitoring program for non-indigenous species (NIS), Sweden 2024. Version 1.1. University of Gothenburg. Occurrence dataset. https://www.gbif.se/ipt/resource?r=nis_monitor_2024&v=1.1
權利
研究者應尊重以下權利聲明。:
此資料的發布者及權利單位為 University of Gothenburg。 To the extent possible under law, the publisher has waived all rights to these data and has dedicated them to the Public Domain (CC0 1.0). Users may copy, modify, distribute and use the work, including for commercial purposes, without restriction.
GBIF 註冊
此資源已向GBIF註冊，並指定以下之GBIF UUID: 56d92b6b-308b-45a4-93d4-a41406c91de6。 University of Gothenburg 發佈此資源，並經由GBIF Sweden同意向GBIF註冊成為資料發佈者。
關鍵字
Occurrence; Observation; non-indigenous species; alien species; invasive species; metabarcoding; COI; eDNA; Autonomous Reef Monitoring Structures (ARMS); early warning; range shift
聯絡資訊
- 出處 ●
- 連絡人
- +46766183827
https://orcid.org/0000-0003-0264-9631
地理涵蓋範圍
Samples were collected along the Swedish coast, including the Bothnian gulf, the Swedish West coast and Southern east coast.
| 界定座標範圍 | 緯度南界 經度西界 [55.425, 11.702], 緯度北界 經度東界 [62.492, 19.07] |
|---|
分類群涵蓋範圍
無相關描述
| Kingdom | Chromista, Animalia, Plantae, Unassigned |
|---|---|
| Phylum | Arthropoda, Nemertea, Ctenophora, Gastrotricha, Oomycota, Echinodermata, Mollusca, Platyhelminthes, Bryozoa, Rotifera, Annelida, Chordata, Rhodophyta, Xenacoelomorpha, Porifera, Nematoda, Chaetognatha, Phoronida, Cnidaria |
| Class | Clitellata, Polychaeta, Aves, Sagittoidea, Ascidiacea, Diplopoda, Gastrotricha_X, Maxillopoda, Gastropoda, Demospongiae, Bangiophyceae, Eurotatoria, Pilidiophora, Arthropoda_X, Insecta, Gymnolaemata, Copepoda, Echinoidea, Scyphozoa, Ophiuroidea, Malacostraca, Hydrozoa, Florideophyceae, Hoplonemertea, Chordata_X, Arachnida, Bivalvia, Leptocardii, Mammalia, Phylactolaemata, Collembola, Anthozoa, Turbellaria, Peronosporea, Chromadorea, Xenacoelomorpha_X, Staurozoa, Phoronida_X, Tentaculata, Branchiopoda, Asteroidea |
時間涵蓋範圍
| 起始日期 / 結束日期 | 2024-05-25 / 2024-09-28 |
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取樣方法
All sampling was carried out by Seanalytics. Plankton was collected with a Hydro-Bios Apstein 90µm net, diameter 40 cm opening. Samples were pulled from the bottom upwards, two pulls per site. The samples were collected in a 1-litre jar and fixed with 96% ethanol in an amount that ensured that the final concentration did not fall below 70%. A total of three samples were collected per site. Water samples were taken with Ruttner water sampler, 1 liter at the surface and 1 liter at a depth of 3-6 meters at each location. These samples were combined in a 2-liter disposable container and stored in cool bags with ice packs until filtration. A total of 10 samples from each location were collected. Water samples were filtered (Sterivex 0.45µl) immediately with a peristaltic pump connected to an electric drill and fixed with 95% ethanol and sealed with stoppers. Between rooms, 10% chlorine solution was pumped through and then rinsed thoroughly. This was also done before the blank sample (0.5 liters of deionized water) for contamination control. All samples were stored in a -20° C freezer until extraction.
| 研究範圍 | Samples were collected long the Swedish west coast, in ports and marinas during early summer and autumn 2024 |
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| 品質控管 | Quality control was performed following the handbook and the Molecular Standard Operation Procedures (MSOP) published by ARMS-MBON (https://data.arms-mbon.org). |
方法步驟描述:
- All sample locations were revisited and hence samples 2x during the year. Analytical protocols followed the steps described by Daraghmeh et al (2025) A Long- Term Ecological Research Data Set From the Marine Genetic Monitoring Program ARMS-MBON 2018–2020. Molecular Ecology Resources, 2025; 0:e14073, https://doi.org/10.1111/1755-0998.14073.
額外的詮釋資料
| 致謝 | The data collection was funded by the Swedish Agency for Marine and Water Management (SwAM) as well as Länsstyrelsen Västra Götaland (Lst VGR). |
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| 目的 | Samples of water (eDNA), plankton and settlement plates were taken in ports and marinas along the Swedish coastline during early summer and autumn 2024. A total of 249 samples were taken (including blanks and positive controls), leading to identification of 494 species based on 4264 amplicon sequence variants (ASVs). Scanning for non-indigenous species (NIS) resulted in 873 observations of 33 known and putative NIS as well as 10 crytogenic species. Raw genetic sequence data are submitted to ENA. |
| 替代的識別碼 | 56d92b6b-308b-45a4-93d4-a41406c91de6 |
| https://www.gbif.se/ipt/resource?r=nis_monitor_2024 |