Svampar i Sverige

Occurrence Observation
Latest version published by Department of Soil and Environment, Swedish University of Agricultural Sciences (SLU) on May 29, 2026 Department of Soil and Environment, Swedish University of Agricultural Sciences (SLU)
Publication date:
29 May 2026
License:
CC-BY 4.0

Download the latest version of this resource data as a Darwin Core Archive (DwC-A) or the resource metadata as EML or RTF:

Data as a DwC-A file download 38,658 records in English (6 MB) - Update frequency: as needed
Metadata as an EML file download in English (18 KB)
Metadata as an RTF file download in English (9 KB)

Description

A collection of forest soil samples collected sampling was carried out in connection with the Swedish Forest Soil Inventory during 2014–2016. Organic topsoil samples were collected in 3 m2 plots in 359 conifer-dominated forest stands distributed across the Swedish boreal biome from 60° to 68° N and from 12° to 24° E. ITS2 markers were amplified from extracted DNA using the fungal-specific primer gITS7 and a 3:1 mix of the reverse primers ITS4 and ITS4arch, with both forward and reverse primers fitted with unique 8 bp sample identification tags. Composite amplicon samples were sequenced on the RSII platform (Pacific Biosciences) by SciLifeLab NGI (Uppsala, Sweden) after the addition of sequencing adaptors by ligation. This dataset was published via the SBDI ASV portal

Data Records

The data in this occurrence resource has been published as a Darwin Core Archive (DwC-A), which is a standardized format for sharing biodiversity data as a set of one or more data tables. The core data table contains 38,658 records.

1 extension data tables also exist. An extension record supplies extra information about a core record. The number of records in each extension data table is illustrated below.

Occurrence (core)
38658
dnaDerivedData 
38658

This IPT archives the data and thus serves as the data repository. The data and resource metadata are available for download in the downloads section. The versions table lists other versions of the resource that have been made publicly available and allows tracking changes made to the resource over time.

Versions

The table below shows only published versions of the resource that are publicly accessible.

How to cite

Researchers should cite this work as follows:

Lindahl B, Dahlberg A, Stendahl J (2026). Svampar i Sverige. Version 1.0. Department of Soil and Environment, Swedish University of Agricultural Sciences (SLU). Occurrence dataset. https://www.gbif.se/ipt/resource?r=prjna693127-its2&v=1.0

Rights

Researchers should respect the following rights statement:

The publisher and rights holder of this work is Department of Soil and Environment, Swedish University of Agricultural Sciences (SLU). This work is licensed under a Creative Commons Attribution (CC-BY 4.0) License.

GBIF Registration

This resource has been registered with GBIF, and assigned the following GBIF UUID: e580b31b-5852-4599-a8f5-7b5b0d2883b5.  Department of Soil and Environment, Swedish University of Agricultural Sciences (SLU) publishes this resource, and is itself registered in GBIF as a data publisher endorsed by GBIF Sweden.

Keywords

Occurrence; Observation

Contacts

Björn Lindahl
  • Originator ●
  • Point Of Contact
Swedish University of Agricultural Sciences
Uppsala
SE
Anders Dahlberg
  • Originator
Swedish University of Agricultural Sciences
Uppsala
SE
Johan Stendahl
  • Originator
Swedish University of Agricultural Sciences
Uppsala
SE
Julia Kyaschenko
  • Point Of Contact
Uppsala University
752 60 Uppsala
Sverige
SE

Geographic Coverage

Sweden

Bounding Coordinates South West [59.964, 12.273], North East [68.11, 23.768]

Taxonomic Coverage

N/A

Kingdom Fungi
Phylum Basidiobolomycota, Entorrhizomycota, Mucoromycota, Olpidiomycota, Ascomycota, Rozellomycota, Mortierellomycota, Glomeromycota, Basidiomycota, Chytridiomycota
Order Glomeromycetes, Rozellomycotina_cls_Incertae_sedis, Pezizomycotina_cls_Incertae_sedis, Rozellomycota_cls_Incertae_sedis, Ustilaginomycetes, Mortierellomycetes, Sordariomycetes, Chytridiomycetes, Spiculogloeomycetes, Cystobasidiomycetes, Umbelopsidomycetes, Pezizomycetes, Agaricomycetes, Microbotryomycetes, Archaeorhizomycetes, Entorrhizomycetes, Agaricostilbomycetes, Candelariomycetes, Dothideomycetes, Mucoromycotina_cls_Incertae_sedis, Basidiobolomycetes, Geminibasidiomycetes, GS25, Saccharomycetes, Orbiliomycetes, Tritirachiomycetes, Rhizophydiomycetes, Pucciniomycetes, Leotiomycetes, GS27, GS18, Lecanoromycetes, Endogonomycetes, Dacrymycetes, Spizellomycetes, Ascomycota_cls_Incertae_sedis, Geoglossomycetes, Eurotiomycetes, Mucoromycetes, Tremellomycetes

Temporal Coverage

Start Date / End Date 2014-07-07 / 2016-09-01

Bibliographic Citations

  1. Kyaschenko, J., Tångrot, J., Dahlberg, A., Lindahl, B.D. & Rosling, A., 2026. Consistent species richness patterns but not richness estimates based on both ASV and OTU inference methods on ITS2-based soil fungal communities. Environmental DNA, 8(1) 10.1002/edn3.70246
  2. Lindahl, B.D., Kyaschenko, J., Varenius, K., Clemmensen, K.E., Dahlberg, A., Karltun, E. and Stendahl, J. (2021), A group of ectomycorrhizal fungi restricts organic matter accumulation in boreal forest. Ecol Lett, 24: 1341-1351. 10.1111/ele.13746